Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Gm13436-201ENSMUST00000120418 567 ntBASIC17.41■□□□□ 0.38
Ssr1Q9CY50 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssr1Q9CY50 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Gm7213-201ENSMUST00000215977 950 ntBASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssr1Q9CY50 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssr1Q9CY50 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Gm16061-201ENSMUST00000122167 857 ntBASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Gm13474-201ENSMUST00000122466 815 ntBASIC17.39■□□□□ 0.37
Ssr1Q9CY50 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms