Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.33■□□□□ 0.04
Ndufs4Q9CXZ1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufs4Q9CXZ1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Gm13312-201ENSMUST00000119631 718 ntBASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Gm27357-201ENSMUST00000183754 135 ntBASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufs4Q9CXZ1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufs4Q9CXZ1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Ank2-226ENSMUST00000189368 339 ntBASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ndufs4Q9CXZ1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms