Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh23Q99PF4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh23Q99PF4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cdh23Q99PF4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.27■□□□□ 0.19
Cdh23Q99PF4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.27■□□□□ 0.19
Cdh23Q99PF4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cdh23Q99PF4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Gm5779-201ENSMUST00000218467 910 ntBASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Mir6404-201ENSMUST00000183699 94 ntBASIC16.26■□□□□ 0.19
Cdh23Q99PF4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Gm9682-201ENSMUST00000197505 556 ntBASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh23Q99PF4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Gm27618-201ENSMUST00000183671 60 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh23Q99PF4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm6007-201ENSMUST00000208170 823 ntBASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Gm8344-201ENSMUST00000119813 856 ntBASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh23Q99PF4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Gm15487-201ENSMUST00000122373 465 ntBASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms