Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.17■□□□□ 0.02
Nkd1Q99MH6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd1Q99MH6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd1Q99MH6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd1Q99MH6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd1Q99MH6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd1Q99MH6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Gm44450-201ENSMUST00000199528 114 ntBASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Gm7213-201ENSMUST00000215977 950 ntBASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd1Q99MH6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Gm18421-201ENSMUST00000204122 625 ntBASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd1Q99MH6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Nkd1Q99MH6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.14■□□□□ 0.01
Nkd1Q99MH6 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd1Q99MH6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkd1Q99MH6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkd1Q99MH6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms