Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaipQ99ME3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.59■□□□□ 0.25
SncaipQ99ME3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SncaipQ99ME3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.59■□□□□ 0.25
SncaipQ99ME3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.59■□□□□ 0.25
SncaipQ99ME3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.59■□□□□ 0.25
SncaipQ99ME3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.59■□□□□ 0.25
SncaipQ99ME3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SncaipQ99ME3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SncaipQ99ME3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SncaipQ99ME3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SncaipQ99ME3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.58■□□□□ 0.24
SncaipQ99ME3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaipQ99ME3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.57■□□□□ 0.24
SncaipQ99ME3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaipQ99ME3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.56■□□□□ 0.24
SncaipQ99ME3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.56■□□□□ 0.24
SncaipQ99ME3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaipQ99ME3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.55■□□□□ 0.24
SncaipQ99ME3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SncaipQ99ME3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.55■□□□□ 0.24
SncaipQ99ME3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SncaipQ99ME3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms