Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Gm7461-201ENSMUST00000058918 827 ntBASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Mir6404-201ENSMUST00000183699 94 ntBASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Gm28659-201ENSMUST00000188013 759 ntBASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha11Q91Y19 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha11Q91Y19 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha11Q91Y19 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Mir8098-201ENSMUST00000184011 137 ntBASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha11Q91Y19 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Haglr-201ENSMUST00000100000 2085 ntBASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Gm25406-201ENSMUST00000157599 105 ntBASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Gm5864-201ENSMUST00000202263 970 ntBASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Gm7506-201ENSMUST00000207758 815 ntBASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha11Q91Y19 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms