Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm25406-201ENSMUST00000157599 105 ntBASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdha9Q91Y11 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Gm9103-201ENSMUST00000119371 405 ntBASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha9Q91Y11 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Gm28033-201ENSMUST00000184224 96 ntBASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha9Q91Y11 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms