Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb22Q91XZ8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb22Q91XZ8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Gm9172-201ENSMUST00000212092 954 ntBASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb22Q91XZ8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb22Q91XZ8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Gm6257-201ENSMUST00000163864 910 ntBASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb22Q91XZ8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms