Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb5Q91XZ5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gm2756-201ENSMUST00000195851 400 ntBASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb5Q91XZ5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Gm43575-201ENSMUST00000196420 516 ntBASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb5Q91XZ5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb5Q91XZ5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Gm4995-201ENSMUST00000117247 432 ntBASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb5Q91XZ5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb5Q91XZ5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
Pcdhb5Q91XZ5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdhb5Q91XZ5 Gm8344-201ENSMUST00000119813 856 ntBASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Gm24513-201ENSMUST00000174964 138 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms