Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb6Q91XZ4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gm27704-201ENSMUST00000185094 107 ntBASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb6Q91XZ4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb6Q91XZ4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb6Q91XZ4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb6Q91XZ4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb6Q91XZ4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb6Q91XZ4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb6Q91XZ4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms