Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga3Q91XY5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Gm11355-201ENSMUST00000121120 306 ntBASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga3Q91XY5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga3Q91XY5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga3Q91XY5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms