Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb4Q91XX6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb4Q91XX6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Gm6345-202ENSMUST00000180900 204 ntBASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb4Q91XX6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Mir7071-201ENSMUST00000184847 69 ntBASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 App-207ENSMUST00000227737 2827 ntBASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb4Q91XX6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms