Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb11Q91UZ8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Gm17807-201ENSMUST00000186869 298 ntBASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb11Q91UZ8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb11Q91UZ8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb11Q91UZ8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms