Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.62■□□□□ 0.25
Trim60Q8VI40 Gm13436-201ENSMUST00000120418 567 ntBASIC16.62■□□□□ 0.25
Trim60Q8VI40 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.62■□□□□ 0.25
Trim60Q8VI40 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trim60Q8VI40 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim60Q8VI40 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.6■□□□□ 0.25
Trim60Q8VI40 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Mir5130-201ENSMUST00000175160 84 ntBASIC16.6■□□□□ 0.25
Trim60Q8VI40 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim60Q8VI40 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms