Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Mir449b-201ENSMUST00000104833 80 ntBASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm27300-201ENSMUST00000184085 97 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm27335-201ENSMUST00000184758 97 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cspg4Q8VHY0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm13597-201ENSMUST00000121239 375 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm27301-201ENSMUST00000184012 127 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cspg4Q8VHY0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms