Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Sybu-209ENSMUST00000228639 4113 ntBASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Gm37856-201ENSMUST00000191634 999 ntBASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40cQ8VHQ4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rab40cQ8VHQ4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rab40cQ8VHQ4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rab40cQ8VHQ4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Trmt13-210ENSMUST00000198454 880 ntBASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 App-207ENSMUST00000227737 2827 ntBASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40cQ8VHQ4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40cQ8VHQ4 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms