Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm13597-201ENSMUST00000121239 375 ntBASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm45747-201ENSMUST00000212203 999 ntBASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Mir449b-201ENSMUST00000104833 80 ntBASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Gm11745-201ENSMUST00000121669 448 ntBASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Rprl2-201ENSMUST00000157150 290 ntBASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lmcd1Q8VEE1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm8344-201ENSMUST00000119813 856 ntBASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm18889-201ENSMUST00000174284 929 ntBASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lmcd1Q8VEE1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm15358-201ENSMUST00000119249 520 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms