Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.06■□□□□ 0.32
Smg8Q8VE18 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.06■□□□□ 0.32
Smg8Q8VE18 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Haglr-201ENSMUST00000100000 2085 ntBASIC17.05■□□□□ 0.32
Smg8Q8VE18 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Gm27646-201ENSMUST00000183989 110 ntBASIC17.05■□□□□ 0.32
Smg8Q8VE18 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.05■□□□□ 0.32
Smg8Q8VE18 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg8Q8VE18 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Gm13036-201ENSMUST00000117799 748 ntBASIC17.04■□□□□ 0.32
Smg8Q8VE18 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.04■□□□□ 0.32
Smg8Q8VE18 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Gm27628-201ENSMUST00000184911 107 ntBASIC17.04■□□□□ 0.32
Smg8Q8VE18 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Psmb5-202ENSMUST00000227257 622 ntBASIC17.04■□□□□ 0.32
Smg8Q8VE18 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg8Q8VE18 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Gm7222-201ENSMUST00000117512 906 ntBASIC17.03■□□□□ 0.32
Smg8Q8VE18 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.03■□□□□ 0.32
Smg8Q8VE18 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg8Q8VE18 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms