Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm21559-201ENSMUST00000220638 855 ntBASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm8587-201ENSMUST00000076538 843 ntBASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Gm15565-201ENSMUST00000118890 427 ntBASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lsm1Q8VC85 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm1Q8VC85 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms