Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Gm27646-201ENSMUST00000183989 110 ntBASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Gm18622-201ENSMUST00000219361 595 ntBASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp33Q8R5K2 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp33Q8R5K2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Mir8117-201ENSMUST00000184773 107 ntBASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp33Q8R5K2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.38■□□□□ 0.53
Usp33Q8R5K2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp33Q8R5K2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp33Q8R5K2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Gm5682-201ENSMUST00000173402 505 ntBASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Auts2-212ENSMUST00000178555 309 ntBASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp33Q8R5K2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms