Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.2■□□□□ 0.66
Top1mtQ8R4U6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Olfr129-201ENSMUST00000122318 993 ntBASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Top1mtQ8R4U6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.18■□□□□ 0.66
Top1mtQ8R4U6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Top1mtQ8R4U6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms