Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.12□□□□□ -0.31
Nup35Q8R4R6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup35Q8R4R6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup35Q8R4R6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Gm44450-201ENSMUST00000199528 114 ntBASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Timm23-208ENSMUST00000226683 750 ntBASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup35Q8R4R6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.09□□□□□ -0.31
Nup35Q8R4R6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms