Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chrna3Q8R4G9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna3Q8R4G9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chrna3Q8R4G9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.71■□□□□ 0.1
Chrna3Q8R4G9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chrna3Q8R4G9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chrna3Q8R4G9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.71■□□□□ 0.1
Chrna3Q8R4G9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms