Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf3c5Q8R2T8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf3c5Q8R2T8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf3c5Q8R2T8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf3c5Q8R2T8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf3c5Q8R2T8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Gm40377-201ENSMUST00000204604 2015 ntBASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.83■□□□□ 0.61
Gtf3c5Q8R2T8 Gm15372-201ENSMUST00000120729 834 ntBASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.83■□□□□ 0.6
Gtf3c5Q8R2T8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c5Q8R2T8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c5Q8R2T8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c5Q8R2T8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms