Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim31Q8R0K2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim31Q8R0K2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Gm29707-201ENSMUST00000196325 491 ntBASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim31Q8R0K2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.71■□□□□ 0.1
Trim31Q8R0K2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trim31Q8R0K2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms