Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.12□□□□□ -0.79
Cystm1Q8K353 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Gm15375-201ENSMUST00000119510 849 ntBASIC10.11□□□□□ -0.79
Cystm1Q8K353 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Mir8112-201ENSMUST00000184382 131 ntBASIC10.11□□□□□ -0.79
Cystm1Q8K353 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cystm1Q8K353 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.1□□□□□ -0.79
Cystm1Q8K353 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.1□□□□□ -0.79
Cystm1Q8K353 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.1□□□□□ -0.79
Cystm1Q8K353 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cystm1Q8K353 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cystm1Q8K353 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms