Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hmgcs1Q8JZK9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 App-207ENSMUST00000227737 2827 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm27389-201ENSMUST00000183622 195 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm21559-201ENSMUST00000220638 855 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm8587-201ENSMUST00000076538 843 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hmgcs1Q8JZK9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgcs1Q8JZK9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgcs1Q8JZK9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Hmgcs1Q8JZK9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Hmgcs1Q8JZK9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgcs1Q8JZK9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Gm22697-201ENSMUST00000175194 63 ntBASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms