Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim5Q8CI51 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim5Q8CI51 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim5Q8CI51 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim5Q8CI51 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim5Q8CI51 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms