Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShfQ8CG80 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ShfQ8CG80 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ShfQ8CG80 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Mir5130-201ENSMUST00000175160 84 ntBASIC14.33□□□□□ -0.12
ShfQ8CG80 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Gm45058-201ENSMUST00000205810 766 ntBASIC14.33□□□□□ -0.12
ShfQ8CG80 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
ShfQ8CG80 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
ShfQ8CG80 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ShfQ8CG80 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShfQ8CG80 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.32□□□□□ -0.12
ShfQ8CG80 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ShfQ8CG80 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShfQ8CG80 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.31□□□□□ -0.12
ShfQ8CG80 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ShfQ8CG80 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ShfQ8CG80 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 App-207ENSMUST00000227737 2827 ntBASIC14.31□□□□□ -0.12
ShfQ8CG80 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShfQ8CG80 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.3□□□□□ -0.12
ShfQ8CG80 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms