Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Gm44430-201ENSMUST00000203376 995 ntBASIC18.4■□□□□ 0.54
Smc2Q8CG48 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc2Q8CG48 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc2Q8CG48 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc2Q8CG48 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Smc2Q8CG48 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc2Q8CG48 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Gm10231-201ENSMUST00000181584 441 ntBASIC18.39■□□□□ 0.53
Smc2Q8CG48 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Gm10175-202ENSMUST00000208752 441 ntBASIC18.39■□□□□ 0.53
Smc2Q8CG48 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc2Q8CG48 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc2Q8CG48 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Mir770-201ENSMUST00000103252 94 ntBASIC18.37■□□□□ 0.53
Smc2Q8CG48 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.37■□□□□ 0.53
Smc2Q8CG48 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc2Q8CG48 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.36■□□□□ 0.53
Smc2Q8CG48 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms