Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Gm9987-201ENSMUST00000069768 567 ntBASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc38Q8CDN8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc38Q8CDN8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc38Q8CDN8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc38Q8CDN8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms