Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ufl1Q8CCJ3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ufl1Q8CCJ3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Gm7222-201ENSMUST00000117512 906 ntBASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Gm27646-201ENSMUST00000183989 110 ntBASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ufl1Q8CCJ3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ufl1Q8CCJ3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Gm13036-201ENSMUST00000117799 748 ntBASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ufl1Q8CCJ3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ufl1Q8CCJ3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms