Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vps53Q8CCB4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.64■□□□□ 0.58
Vps53Q8CCB4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vps53Q8CCB4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vps53Q8CCB4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Vps53Q8CCB4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps53Q8CCB4 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Gm13884-201ENSMUST00000118103 829 ntBASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps53Q8CCB4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Gm11336-201ENSMUST00000118168 334 ntBASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Gm5867-201ENSMUST00000063197 592 ntBASIC18.62■□□□□ 0.57
Vps53Q8CCB4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.62■□□□□ 0.57
Vps53Q8CCB4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps53Q8CCB4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.61■□□□□ 0.57
Vps53Q8CCB4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms