Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Mir6404-201ENSMUST00000183699 94 ntBASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Gm27867-201ENSMUST00000184778 125 ntBASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc60Q8C4J0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc60Q8C4J0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Gm15165-201ENSMUST00000118140 502 ntBASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccdc60Q8C4J0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc60Q8C4J0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Gm15372-201ENSMUST00000120729 834 ntBASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms