Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rft1Q8C3B8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rft1Q8C3B8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Mir5130-201ENSMUST00000175160 84 ntBASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Gm45058-201ENSMUST00000205810 766 ntBASIC14.34□□□□□ -0.11
Rft1Q8C3B8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rft1Q8C3B8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rft1Q8C3B8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms