Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp44Q8C2S0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp44Q8C2S0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.77■□□□□ 0.59
Usp44Q8C2S0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Gm6257-201ENSMUST00000163864 910 ntBASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Gm25745-201ENSMUST00000174945 133 ntBASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp44Q8C2S0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Usp44Q8C2S0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.74■□□□□ 0.59
Usp44Q8C2S0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Usp44Q8C2S0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Gm9172-201ENSMUST00000212092 954 ntBASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp44Q8C2S0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms