Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps9d1Q8C190 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Vps9d1Q8C190 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Phf7-203ENSMUST00000226565 1971 ntBASIC15.06■□□□□ 0
Vps9d1Q8C190 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.06■□□□□ 0
Vps9d1Q8C190 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.06■□□□□ 0
Vps9d1Q8C190 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.06■□□□□ 0
Vps9d1Q8C190 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.06■□□□□ 0
Vps9d1Q8C190 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps9d1Q8C190 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vps9d1Q8C190 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Vps9d1Q8C190 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps9d1Q8C190 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Gm13186-201ENSMUST00000118031 316 ntBASIC15.05■□□□□ -0
Vps9d1Q8C190 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps9d1Q8C190 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.05■□□□□ -0
Vps9d1Q8C190 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps9d1Q8C190 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
Vps9d1Q8C190 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Gm2274-201ENSMUST00000184539 609 ntBASIC15.04■□□□□ -0
Vps9d1Q8C190 Gm7889-201ENSMUST00000185591 958 ntBASIC15.04■□□□□ -0
Vps9d1Q8C190 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Vps9d1Q8C190 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps9d1Q8C190 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Vps9d1Q8C190 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps9d1Q8C190 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.03■□□□□ -0
Vps9d1Q8C190 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.03■□□□□ -0
Vps9d1Q8C190 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.03■□□□□ -0
Vps9d1Q8C190 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms