Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trub1Q8C0D0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Mir6404-201ENSMUST00000183699 94 ntBASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trub1Q8C0D0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trub1Q8C0D0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Olfr129-201ENSMUST00000122318 993 ntBASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trub1Q8C0D0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms