Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Usp47Q8BY87 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp47Q8BY87 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC22.6■■□□□ 1.21
Usp47Q8BY87 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp47Q8BY87 Gm3928-201ENSMUST00000121141 1307 ntBASIC22.59■■□□□ 1.21
Usp47Q8BY87 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Usp47Q8BY87 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC22.59■■□□□ 1.21
Usp47Q8BY87 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC22.59■■□□□ 1.21
Usp47Q8BY87 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp47Q8BY87 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Usp47Q8BY87 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.59■■□□□ 1.21
Usp47Q8BY87 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp47Q8BY87 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Gm37500-201ENSMUST00000192059 1443 ntBASIC22.58■■□□□ 1.21
Usp47Q8BY87 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Usp47Q8BY87 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC22.58■■□□□ 1.21
Usp47Q8BY87 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC22.58■■□□□ 1.21
Usp47Q8BY87 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Usp47Q8BY87 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
Usp47Q8BY87 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Gm8344-201ENSMUST00000119813 856 ntBASIC22.57■■□□□ 1.2
Usp47Q8BY87 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp47Q8BY87 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Gm5682-201ENSMUST00000173402 505 ntBASIC22.56■■□□□ 1.2
Usp47Q8BY87 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC22.56■■□□□ 1.2
Usp47Q8BY87 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.56■■□□□ 1.2
Usp47Q8BY87 AC093926.2-201ENSMUST00000214468 1228 ntBASIC22.56■■□□□ 1.2
Usp47Q8BY87 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp47Q8BY87 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms