Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Usp40Q8BWR4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Usp40Q8BWR4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.96■■□□□ 1.11
Usp40Q8BWR4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Usp40Q8BWR4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Usp40Q8BWR4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Usp40Q8BWR4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Gm2213-201ENSMUST00000197485 688 ntBASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Gm45167-201ENSMUST00000208007 322 ntBASIC21.94■■□□□ 1.1
Usp40Q8BWR4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp40Q8BWR4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Gm15358-201ENSMUST00000119249 520 ntBASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Gm6257-201ENSMUST00000163864 910 ntBASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp40Q8BWR4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp40Q8BWR4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Gm27702-201ENSMUST00000184512 56 ntBASIC21.91■■□□□ 1.1
Usp40Q8BWR4 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp40Q8BWR4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Usp40Q8BWR4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms