Protein–RNA interactions for Protein: Q8BVM9

Phf11a, PHD finger protein 11A, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11aQ8BVM9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Phf11aQ8BVM9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Phf11aQ8BVM9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.04■□□□□ -0
Phf11aQ8BVM9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Gm8520-201ENSMUST00000186517 868 ntBASIC15.04■□□□□ -0
Phf11aQ8BVM9 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.04■□□□□ -0
Phf11aQ8BVM9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.04■□□□□ -0
Phf11aQ8BVM9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.04■□□□□ -0
Phf11aQ8BVM9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.03■□□□□ -0
Phf11aQ8BVM9 Gm44450-201ENSMUST00000199528 114 ntBASIC15.03■□□□□ -0
Phf11aQ8BVM9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.03■□□□□ -0
Phf11aQ8BVM9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf11aQ8BVM9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.02■□□□□ -0
Phf11aQ8BVM9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Gm18115-201ENSMUST00000221209 621 ntBASIC15.02■□□□□ -0
Phf11aQ8BVM9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.02■□□□□ -0
Phf11aQ8BVM9 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.02■□□□□ -0
Phf11aQ8BVM9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Phf11aQ8BVM9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf11aQ8BVM9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf11aQ8BVM9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms