Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm8097-201ENSMUST00000117903 829 ntBASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm8655-201ENSMUST00000221159 852 ntBASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk5rap1Q8BTW8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm2651-201ENSMUST00000203560 838 ntBASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm10060-201ENSMUST00000212002 111 ntBASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdk5rap1Q8BTW8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm25990-201ENSMUST00000102440 86 ntBASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm13418-201ENSMUST00000119097 944 ntBASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdk5rap1Q8BTW8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk5rap1Q8BTW8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk5rap1Q8BTW8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk5rap1Q8BTW8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms