Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab11fip4Q8BQP8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab11fip4Q8BQP8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip4Q8BQP8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip4Q8BQP8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rab11fip4Q8BQP8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Dancr-204ENSMUST00000132389 2347 ntBASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip4Q8BQP8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip4Q8BQP8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rab11fip4Q8BQP8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip4Q8BQP8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip4Q8BQP8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Rab11fip4Q8BQP8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms