Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Rprl3-201ENSMUST00000157400 290 ntBASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Gm18669-201ENSMUST00000216049 778 ntBASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sfr1Q8BP27 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sfr1Q8BP27 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Gm9103-201ENSMUST00000119371 405 ntBASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sfr1Q8BP27 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sfr1Q8BP27 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.28■□□□□ 0.2
Sfr1Q8BP27 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms