Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ckap4Q8BMK4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Gm18959-201ENSMUST00000208954 655 ntBASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ckap4Q8BMK4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Gm15565-201ENSMUST00000118890 427 ntBASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Mir5130-201ENSMUST00000175160 84 ntBASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.21■□□□□ 0.03
Ckap4Q8BMK4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ckap4Q8BMK4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Gm7889-201ENSMUST00000185591 958 ntBASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ckap4Q8BMK4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms