Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Thap2-203ENSMUST00000218989 527 ntBASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col16a1Q8BLX7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Gm18889-201ENSMUST00000174284 929 ntBASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col16a1Q8BLX7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col16a1Q8BLX7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col16a1Q8BLX7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col16a1Q8BLX7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col16a1Q8BLX7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col16a1Q8BLX7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col16a1Q8BLX7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Rpph1-201ENSMUST00000175096 319 ntBASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col16a1Q8BLX7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col16a1Q8BLX7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Col16a1Q8BLX7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms