Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smg1Q8BKX6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Gm5177-201ENSMUST00000183092 997 ntBASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Gm11745-201ENSMUST00000121669 448 ntBASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smg1Q8BKX6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Gm15427-201ENSMUST00000117288 531 ntBASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.47□□□□□ -0.25
Smg1Q8BKX6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smg1Q8BKX6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.46□□□□□ -0.25
Smg1Q8BKX6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smg1Q8BKX6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms