Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Gm18958-201ENSMUST00000174258 762 ntBASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Gm26571-201ENSMUST00000181399 666 ntBASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc5a7Q8BGY9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc5a7Q8BGY9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms