Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpidrQ8BGX7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SpidrQ8BGX7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Gm6257-201ENSMUST00000163864 910 ntBASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Gm9682-201ENSMUST00000197505 556 ntBASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SpidrQ8BGX7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SpidrQ8BGX7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.59■□□□□ 0.57
SpidrQ8BGX7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Gm19164-201ENSMUST00000210667 640 ntBASIC18.59■□□□□ 0.57
SpidrQ8BGX7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SpidrQ8BGX7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SpidrQ8BGX7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.58■□□□□ 0.56
SpidrQ8BGX7 Gm13597-201ENSMUST00000121239 375 ntBASIC18.58■□□□□ 0.56
SpidrQ8BGX7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms