Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim65Q8BFW4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim65Q8BFW4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim65Q8BFW4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.21■□□□□ 0.34
Trim65Q8BFW4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim65Q8BFW4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim65Q8BFW4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.19■□□□□ 0.34
Trim65Q8BFW4 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.19■□□□□ 0.34
Trim65Q8BFW4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim65Q8BFW4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Olfr129-201ENSMUST00000122318 993 ntBASIC17.18■□□□□ 0.34
Trim65Q8BFW4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms